Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs7005656 | chr8:9284770 | C/T | SGK223 | chr8:8175258-8244008:- | 0.33 | 5.97 | 4.67E-9 | Box Plot |
| THCA | rs7005833 | chr8:3303290 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.39 | -6.32 | 6.16E-10 | Box Plot |
| THCA | rs7005884 | chr8:10796472 | A/G | SGK223 | chr8:8175258-8244008:- | 0.37 | 7.13 | 3.64E-12 | Box Plot |
| THCA | rs7005990 | chr8:3260798 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.46 | -9.6 | 4.47E-20 | Box Plot |
| THCA | rs7006193 | chr8:3258625 | A/C | CSMD1 | chr8:2792875-4852494:- | -0.5 | -9.81 | 7.81E-21 | Box Plot |
| THCA | rs7006538 | chr8:11804982 | A/G | SGK223 | chr8:8175258-8244008:- | -0.45 | -8.4 | 5.17E-16 | Box Plot |
| THCA | rs7007394 | chr8:11094566 | G/A | SGK223 | chr8:8175258-8244008:- | 0.33 | 6.5 | 1.99E-10 | Box Plot |
| THCA | rs7007789 | chr8:3255904 | G/C | CSMD1 | chr8:2792875-4852494:- | -0.5 | -10.19 | 3.46E-22 | Box Plot |
| THCA | rs7008205 | chr8:11197323 | T/G | SGK223 | chr8:8175258-8244008:- | -0.36 | -6.79 | 3.41E-11 | Box Plot |
| THCA | rs7008479 | chr8:3245616 | G/A | CSMD1 | chr8:2792875-4852494:- | -0.32 | -6.18 | 1.36E-9 | Box Plot |
| THCA | rs7008818 | chr8:3245819 | G/A | CSMD1 | chr8:2792875-4852494:- | -0.32 | -5.98 | 4.47E-9 | Box Plot |
| THCA | rs7008964 | chr8:3245916 | G/T | CSMD1 | chr8:2792875-4852494:- | -0.33 | -6.14 | 1.72E-9 | Box Plot |
| THCA | rs7009584 | chr8:3245595 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.32 | -6.18 | 1.36E-9 | Box Plot |
| THCA | rs7010586 | chr8:3273822 | C/G | CSMD1 | chr8:2792875-4852494:- | -0.51 | -5.97 | 4.64E-9 | Box Plot |
| THCA | rs7010590 | chr8:11062882 | C/T | SGK223 | chr8:8175258-8244008:- | -0.49 | -9.47 | 1.34E-19 | Box Plot |